
Other than possibly VF3 vs Tekken 3, I've always liked Virtua Fighter better than Tekken. I like the game mechanics a lot better. I loved VF4 on PS2, it was my favorite fighting game of the generation. I just wish the series had been more successful in the US.
You can count me in as one of the people who like SM64 better than Sunshine. Sunshine was good, but I didn't enjoy it as much. Metroid Prime was my 2002 GOTY, but I kind of wish that the Prime games could have incorporated more of the game mechanics from the 2-D games, like the real Space Jump and Screw Attack, and the ability to freeze enemies into platforms. They did pretty good with the Morph Ball, though.
BMX XXX... that and The Guy Game were a couple of the lowest points the video game industry had seen since Custer's Revenge.